Analysing Errors of Open Information Extraction Systems

We report results on benchmarking Open Information Extraction (OIE) systems using RelVis, a toolkit for benchmarking Open Information Extraction systems. Our comprehensive benchmark contains three data sets from the news domain and one data set from Wikipedia with overall 4522 labeled sentences and 11243 binary or n-ary OIE relations. In our analysis on these data sets we compared the performance of four popular OIE systems, ClausIE, OpenIE 4.2, Stanford OpenIE and PredPatt. In addition, we evaluated the impact of five common error classes on a subset of 749 n-ary tuples. From our deep analysis we unreveal important research directions for a next generation of OIE systems.Comment: Accepted at Building Linguistically Generalizable NLP Systems at EMNLP 201

[Bis(diphenyl­phosphino)methane-κ2 P,P′][bis­(diphenyl­phosphinometh­yl)diethoxy­silane-κ2 P,P′]bis­(dinitro­gen)­molybdenum(0) benzene 0.7-solvate

In the crystal structure of the title compound, [Mo(C25H22P2)(C30H34O2P2Si)(N2)2]·0.7C6H6, the Mo atoms are coordinated by four P atoms and two N atoms in a distorted octa­hedral mode. The two C atoms of one of the two eth­oxy groups are disordered and were refined using a split model and site-occupation factors of 0.7:0.3. The crystal structure contains a benzene solvent mol­ecule with a site occupation of 70%

Programme and abstracts / Systematics 2008 : Göttingen 7-11 April 2008 / 10th Annual Meeting of the Gesellschaft für Biologische Systematik

The Göttingen conference Systematics 2008 is the first joint meeting of the Gesellschaft für Biologische Systematik (GfBS) and the German Botanical Society, section Biodiversity and Evolutionary Biology (DBG), being the 10th Annual Meeting of the GfBS and the 18th International Symposium Biodiversity and Evolutionary Biology of the DBG. The conference programme covers biological systematics in the widest sense and provides ample opportunities for oral and poster presentations on new advances in plant, animal and microbial systematics. This volume brings together the abstracts of invited speaches from the plenary sessions on Progress in Deep Phylogeny, Speciation and Phylogeography, and New Trends in Biological Systematics as well as those of submitted talks and poster sessions.The Göttingen conference Systematics 2008 is the first joint meeting of the Gesellschaft für Biologische Systematik (GfBp. and the German Botanical Society, section Biodiversity and Evolutionary Biology (DBG), being the 10th Annual Meeting of the GfBS and the 18th International Symposium Biodiversity and Evolutionary Biology of the DBG. The conference programme covers biological systematics in the widest sense and provides ample opportunities for oral and poster presentations on new advances in plant, animal and microbial systematics. This volume brings together the abstracts of invited speaches from the plenary sessions on Progress in Deep Phylogeny, Speciation and Phylogeography, and New Trends in Biological Systematics as well as those of submitted talks and poster sessions.Kongress: International Symposium Biodiversity and Evolutionary Biology ; 18 (Göttingen) : 2008.04.07-11 Annual meeting of the Gesellschaft für Biologische Systematik ; 10 (Göttingen) : 2008.04.07-11 Joint meeting of the Gesellschaft für Biologische Systematik and the German Botanical Society, Section Biodiversity and Evolutionary Biology ; 1 (Göttingen): 2008.04.07-1

The DZHK research platform: maximisation of scientific value by enabling access to health data and biological samples collected in cardiovascular clinical studies

The German Centre for Cardiovascular Research (DZHK) is one of the German Centres for Health Research and aims to conduct early and guideline-relevant studies to develop new therapies and diagnostics that impact the lives of people with cardiovascular disease. Therefore, DZHK members designed a collaboratively organised and integrated research platform connecting all sites and partners. The overarching objectives of the research platform are the standardisation of prospective data and biological sample collections among all studies and the development of a sustainable centrally standardised storage in compliance with general legal regulations and the FAIR principles. The main elements of the DZHK infrastructure are web-based and central units for data management, LIMS, IDMS, and transfer office, embedded in a framework consisting of the DZHK Use and Access Policy, and the Ethics and Data Protection Concept. This framework is characterised by a modular design allowing a high standardisation across all studies. For studies that require even tighter criteria additional quality levels are defined. In addition, the Public Open Data strategy is an important focus of DZHK. The DZHK operates as one legal entity holding all rights of data and biological sample usage, according to the DZHK Use and Access Policy. All DZHK studies collect a basic set of data and biosamples, accompanied by specific clinical and imaging data and biobanking. The DZHK infrastructure was constructed by scientists with the focus on the needs of scientists conducting clinical studies. Through this, the DZHK enables the interdisciplinary and multiple use of data and biological samples by scientists inside and outside the DZHK. So far, 27 DZHK studies recruited well over 11,200 participants suffering from major cardiovascular disorders such as myocardial infarction or heart failure. Currently, data and samples of five DZHK studies of the DZHK Heart Bank can be applied for

Enhancing crop shelf life with pollination

Background: Globally, high amounts of food are wasted due to insufficient quality and decay. Although pollination has been shown to increase crop quality, a possible impact on shelf life has not been quantitatively studied. Results: We tested how shelf life, represented by fruit decay, firmness and weight, changes as a function of pollination limitation in two European, commercially important strawberry varieties. Pollination limitation resulted in lower amounts of deformed fruits. Whereas 65% of wind-pollinated fruits were deformed, open pollination resulted in only 20% deformed fruits. During storage, the proportion of decayed fruits increased in relation to the degree of deformation. In the variety Yamaska, 80% of the fruits with high degrees of deformation decayed after four days, whereas in the variety Sonata, all highly deformed fruits had already decayed after three days. Fruit weight decreased independent from the degree of deformation. However, strongest deformations resulted in a generally lower fruit weight in Sonata, whereas in Yamaska, also medium deformed fruits had a lower weight than highly deformed fruits. Effects of deformation on firmness declines were mostly variety dependent. Whereas firmness declined similarly for all degrees of deformation for Yamaska, highly deformed fruits lost firmness fastest in Sonata. Conclusions: Our results suggest that crop pollination has the potential to reduce food loss and waste in pollinated crops and thus to contribute to global food security. However, this relationship between pollination and food waste has so far been almost completely ignored. Future pollination research should therefore focus not only on yield effects but also on crop quality. A more comprehensive understanding of how pollination can benefit global food security should lead to a more efficient crop production to help meeting future food demands

Model-Based Optimization And Control Of Chromatographic Processes

: This contribution presents an integrated approach to the optimal operation and automatic control of chromatographic separation processes in batch elution mode as well as in continuous SMB operation. The new approach is based on computationally efficient simulation models and combines techniques from mathematical optimization, parameter estimation and control theory. The resulting algorithms were implemented in an industrial standard control system and the capability of the proposed control approach is demonstrated on the separation of fructose and glucose, both in batch and SMB operation mode. Keywords: Chromatographic separation, simulated moving bed, process control, dynamic optimization, parameter estimation. 1. INTRODUCTION Chromatographic separation processes are an emerging technology for the separation of Life Science products, such as pharmaceuticals, food, and fine chemicals. To improve the economic viability, a countercurrent operation is often desirable, but the r..

Hedgerows Have a Barrier Effect and Channel Pollinator Movement in the Agricultural Landscape

Agricultural intensification and the subsequent fragmentation of semi-natural habitats severely restrict pollinator and pollen movement threatening both pollinator and plant species. Linear landscape elements such as hedgerows are planted for agricultural and conservation purposes to increase the resource availability and habitat connectivity supporting populations of beneficial organisms such as pollinators. However, hedgerows may have unexpected effects on plant and pollinator persistence by not just channeling pollinators and pollen along, but also restricting movement across the strip of habitat. Here, we tested how hedgerows influence pollinator movement and pollen flow. We used fluorescent dye particles as pollen analogues to track pollinator movement between potted cornflowers Centaurea cyanus along and across a hedgerow separating two meadows. The deposition of fluorescent dye was significantly higher along the hedgerow than across the hedgerow and into the meadow, despite comparable pollinator abundances. The differences in pollen transfer suggest that hedgerows can affect pollinator and pollen dispersal by channeling their movement and acting as a permeable barrier. We conclude that hedgerows in agricultural landscapes can increase the connectivity between otherwise isolated plant and pollinator populations (corridor function), but can have additional, and so far unknown barrier effects on pollination services. Functioning as a barrier, linear landscape elements can impede pollinator movement and dispersal, even for highly mobile species such as bees. These results should be considered in future management plans aiming to enhance the persistence of threatened pollinator and plant populations by restoring functional connectivity and to ensure sufficient crop pollination in the agricultural landscape

Short-term lab assessments and microcolonies are insufficient for the risk assessment of insecticides for bees

Risk assessment studies addressing effects of agrochemicals on bumblebees frequently use microcolonies. These are queenless colonies consisting of workers only in which typically one worker will lay unfertilized male-destined eggs. In the first tier of risk assessment for bees, short-term laboratory experiments (e.g. microcolonies) are used, the results of which will determine whether higher tier (semi-)field experiments are needed. To evaluate the suitability of microcolonies for risk assessment, a direct comparison between different assessment methods for the neonicotinoid pesticides acetamiprid and thiacloprid was made: microcolonies and queenright colonies under short-term laboratory conditions, queenright colonies under long-term laboratory conditions, and queenright colonies under field conditions. Here, we demonstrate that results from microcolonies contradict results from queenright colonies. While thiacloprid negatively impacted gyne production in queenright colonies, it had a positive effect on microcolony size. By contrast, thiacloprid had no significant effect on fitness parameters of queenright colonies under short-term laboratory conditions when mostly workers are produced. These results thus highlight both the need for long term assessments, allowing evaluation of gyne production, and the risk of reaching erroneous conclusions when using microcolonies. The negative effect of thiacloprid on colony fitness was confirmed under field conditions, where thiacloprid affected the production of reproductives, colony weight gain, worker weight, and foraging behaviour. For acetamiprid, a negative trend on colony fitness could only be shown in a field setup. Therefore, field-realistic setups, which allow colonies to forage freely, are most appropriate to assess sublethal effects of pesticides affecting behaviour and learning